Core Gene Prediction Model

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Gradient Boosting model is developed based on 25 features that classify whether the Gene is Core or Non-Core. For classifying the Genes, users are requested to submit their data in the form as per the value range provided in the input placeholder. [Note: For predicted value, please check the footer of the table.]

For more details on the predictions module, go through the video tutorial link here: Open Video.

Submission Form
ka/ks ratio sorghum vs B73 :
Transcription Factor EREB 138 Count :
Total PFAM domain Count:
ka/ks ratio Tzi8 vs B73 :
Tandem Genes :
Ear E6 Repression/Activation Histone modification Count :
Transcription Start Site Root Count:
Distance to Knob:
Ks B73 vs Sorghum :
Transposable Elememt Count :
3 Prime UTR Length :
Tri Codon WDR:
Tri Codon HEN :
Tri Codon WAA:
Chromosome 10 :
SNPS :
Transcription Factor 1kb EREB 29 Count :
Tri Codon GRR :
Transcription Start Site Shoot Count :
Gene Breadth :
Distance to Centomere :
Leaf E1 Activation Histone modification Count :
Transcription Factor 1kb ARF 34 Count :
Transcription Factor 1kb EREB 138 Count :
Transcription Factor LBD19 Count :
PREDICT