Souces Table

Maize B73v5 Data	Sources
GFF files and Fasta files	https://download.maizegdb.org/Zm-B73-REFERENCE-NAM-5.0/
VCF Files	NAM-founder-SNPs
G-quadruplexes	https://community.maizegdb.org/sandbox/G4/B73/
Gene and Protein Expression datasets	https://qteller.maizegdb.org/rna_data_sources.php
Histone Modification datasets	Histone modification CHIP-seq data Histone Modification data from paper
DNA Methylation datasets	DNA Methylation data from paper
ATAC seq datasets	ATAC-seq data from paper
Transcription Factor Binding Sites datasets	Ricci 2019 TFBS DAP-seq Bolduc 2012 knotted1 peaks Dong 2019 tb1 peaks
Enhancer datasets	Oka 2017 enhancer binding
Transcription Start Sites datasets	B73v5 TSS
miRNA datasets	B73v5 miRNA
correlation datasets	https://pubmed.ncbi.nlm.nih.gov/30537259/
Insertion datasets	http://www.acdsinsertions.org// https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0077172
Transposable Element datasets	Transposable Elements
Pan-genome datasets	https://pubmed.ncbi.nlm.nih.gov/34353948/
Gene Origin datasets	https://pubmed.ncbi.nlm.nih.gov/34353948/
Classical Genes data	https://www.maizegdb.org/associated_genes?type=classical&style=table